CDS

Accession Number TCMCG016C26941
gbkey CDS
Protein Id OMO53565.1
Location complement(join(17939..18113,18435..18487,18598..18660,18827..18901,19073..19135,19252..19341,19450..19780,19981..20027,20120..20225,20617..20693,20857..21060,21150..21222,21306..21370,21857..21937,23802..23994,24080..24591))
Organism Corchorus capsularis
locus_tag CCACVL1_28545

Protein

Length 735aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01015164.1
Definition JAB1/Mov34/MPN/PAD-1 [Corchorus capsularis]
Locus_tag CCACVL1_28545

EGGNOG-MAPPER Annotation

COG_category T
Description AMSH-like ubiquitin thioesterase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01002        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K11866        [VIEW IN KEGG]
EC 3.4.19.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko04144        [VIEW IN KEGG]
map04144        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005768        [VIEW IN EMBL-EBI]
GO:0005770        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006897        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007033        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010638        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016021        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0016579        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0031224        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032386        [VIEW IN EMBL-EBI]
GO:0032388        [VIEW IN EMBL-EBI]
GO:0032879        [VIEW IN EMBL-EBI]
GO:0032880        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0033157        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044088        [VIEW IN EMBL-EBI]
GO:0044090        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051049        [VIEW IN EMBL-EBI]
GO:0051050        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051130        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051222        [VIEW IN EMBL-EBI]
GO:0051223        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0060341        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070201        [VIEW IN EMBL-EBI]
GO:0070536        [VIEW IN EMBL-EBI]
GO:0070646        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071108        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090087        [VIEW IN EMBL-EBI]
GO:0090316        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098657        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1903827        [VIEW IN EMBL-EBI]
GO:1903829        [VIEW IN EMBL-EBI]
GO:1904951        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGTCTTTCAAGAACACCATCTCAACTCTGTTTCAACTCTCAACAACCGCCCCATGCCTTTTCTTGAGATCAAGAACCCATATTTTCTACATCTCCTTGCTTCTTCTCTCGATCGTCTTCCTTTCAACATCGCTCACCGAGCGATCACCCACCGCATTAGCCTTAGCCTTGGCCTCTCGCCTTCGCCTCGCCGCAAATTACTTCTCTTCCGTTTCTTCTTCAAACACTTGCCTCGTTTCCGACATCCAGAGTAACTGTACTCTGTCTTCTGTCACCATAATCGAAACAACTCCTCGGAATTCAGTAATAGATGGAAGTTACGCCATAAGAAACCTCAGTTCTTGCGATATCTTCGATGGTAACTGGGTCTTGGATGATTCGGATCCTCCTGTTTACCGACCCGGGTCTTGCCCTTATGTCGATGATTCTTTTAACTGCTTCAAGAATGGCCGGGTAAATTTCAGTTACGTTAAATACCGGTGGAAGCCTTTTGGTTGTCAGATTCCAAGGTTTAATGGAAGGAAAATGCTGGAAATGTTAAGAGGGAAGAGAATGGTTTTTGTGGGAGATTCTTTGAATAGGAACATGTGGGAATCATTGCTCTGTTCATTGCGAGAATCATTGAAAGACAAGACAAGAATCTTTGAAGTTTCCAGTAGGAATGAGTTGAAGAATCAAGGGTTCCATTCTTTCAGATTCAGACTCGCACGTTCAGGCTATTCATCTTCTTCGATCGGACTCGGAGGGAAACCGGCAAATTCATCGGCAAACGAGAGAGAAAAGGCCAGCATTTACCGAGAGGAAAATAATATAGTAGATTTGTACATAATACTACTTAGATATTCAAGTTTGGTGTCGGAAACAATACCTTTCCATCGAGATTACCAGGCTTTTCCAAAAGAAAAGGCGGCGTATAGGAAGAGACTCATAGCTGTACTCGATGAGCTTGAAATGTTGAAACCTAAGGTTCACCAGAAAATTGAGGAACTAAATAGAGCCCCTGCAGGGGCTCAATTACTCGAATTAGATGGCCATGAGACAACTCCCTATGGCTCAGAGAAGATGTCAACCTTGGATTGGCCCAATGCCAATAGAGGGTCGAATATGAGCTTGGATACTAAGCAGCATGCCAACATGGCAATTCAATCTACATGGAAGTATAACAATGATCCTAATCTTATTGACAAGCAATTCCAGAAGTTGTCTCTTAATGTACCTCTTCCAAATAAAGAAACTTTATCTAGACACTCATTTTTAGGCCCTAATGGTCTTCGAGGCCAGTGGCTTGGACCAAGGGCAGAGATAAAGGTGCAATATCCAAGCAATATGGACTTGGTACCTGCTGAAAATTCAGGCCTAAATCAGGCTGGAAAATATGGTCCTTTGGCTGTAAAAGATGGTGATTCAGGTGGGTTTAGTTCTGCTATGGAGTCAGTGCTCTCCTTGGATGATGGTCGATGGTCGCATCCTGCTCAGGAGTCATGTCCGCCTTTGATTACCGAAGCAAGGGAGGATCCTTTCCAGTTTGTTGGTATCAGACAACCTACTCCACCTCCTGTTCTTGCTCAAGTGCAGCAAGACTATACTCCAATTCCTCCGTCAAAAGTTGCTGATCCAAGACCTGGTCCAGCAAAGCCTTGTGAAGATGGATCGCCAAACTCTAGTTCATATCAACATTTACATGTTCCTGTACATATGATGGAGGATTTCTTACGACTGGCTCGAGCAAATACAGAAAAAAATTTGGAAACCTGTGCTGTTCTAGCTGGATCATTGAAAAACAGAGTTTTCCACATCACCACACTTATAGTCCCAAAGCAGGAGTCAACTTCAGATTCGTGTTCAACACTAAACGAAGAAGAAATATTCGAAGTTCAAGATAAATTATCTCTTTTCCCTCTGGGGTGGATTCACACGCACCCAAGTCAGACTTGTTTCATGTCGTCAGTTGATCTACACACTCATTATTCATATCAGATTATGTTACCGGAAGCAATCGCAATTGTTATGGCCCCAACTGATACATCCAGCCCGCATGGTATCTTCCATCTCTCCGATCCTGGTGGTGTGTCCATCATTCGCAATTGTCAGCAACGAGGATTCCATCCCCATGAGGAGCCTGAAGATCGAAGCCCCATATATGAGCATTGCTCTCATGTATTTATGAACTCCAAAATAAAGTATGATGTCATTGATCTCCGGTGA
Protein:  
MASFKNTISTLFQLSTTAPCLFLRSRTHIFYISLLLLSIVFLSTSLTERSPTALALALASRLRLAANYFSSVSSSNTCLVSDIQSNCTLSSVTIIETTPRNSVIDGSYAIRNLSSCDIFDGNWVLDDSDPPVYRPGSCPYVDDSFNCFKNGRVNFSYVKYRWKPFGCQIPRFNGRKMLEMLRGKRMVFVGDSLNRNMWESLLCSLRESLKDKTRIFEVSSRNELKNQGFHSFRFRLARSGYSSSSIGLGGKPANSSANEREKASIYREENNIVDLYIILLRYSSLVSETIPFHRDYQAFPKEKAAYRKRLIAVLDELEMLKPKVHQKIEELNRAPAGAQLLELDGHETTPYGSEKMSTLDWPNANRGSNMSLDTKQHANMAIQSTWKYNNDPNLIDKQFQKLSLNVPLPNKETLSRHSFLGPNGLRGQWLGPRAEIKVQYPSNMDLVPAENSGLNQAGKYGPLAVKDGDSGGFSSAMESVLSLDDGRWSHPAQESCPPLITEAREDPFQFVGIRQPTPPPVLAQVQQDYTPIPPSKVADPRPGPAKPCEDGSPNSSSYQHLHVPVHMMEDFLRLARANTEKNLETCAVLAGSLKNRVFHITTLIVPKQESTSDSCSTLNEEEIFEVQDKLSLFPLGWIHTHPSQTCFMSSVDLHTHYSYQIMLPEAIAIVMAPTDTSSPHGIFHLSDPGGVSIIRNCQQRGFHPHEEPEDRSPIYEHCSHVFMNSKIKYDVIDLR